MAINTENANCE OUTAGE:
The University Wiki Service will undergo maintenance from 7:00 a.m. to 8:00 a.m. on Thursday 8/22.
During this maintenance period https://wikis.utexas.edu may be unavailable.
Users are advised to save content that may be needed and to save all edits as unsaved work may be lost.
Page tree
Skip to end of metadata
Go to start of metadata

Overall Course Learning Objectives

  • Be capable of navigating a Linux operating system and TACC's Lonestar system in particular
  • Understand common workflows and tools for NGS analysis:
    • "Re-sequencing" - comparing raw sequence data to a reference genome, calling variants, and annotating variants DNA sequencing data
    • RNA-seq - quantifying gene expression and determining splice variation from RNA-seq data
    • de novo genome assembly and annotation

Learning Objectives: Day 1, Part 1: Linux/TACC Introduction

  • Understand the broadest definition of "biomedical/biological informatics" and where this course fits in
  • Learn and practice essential Linux concepts and commands, including where to get more help & information
  • Learn and practice working with TACC systems (Lonestar in particular)
  • No labels