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course slides

Logging into TACC

Exercises:

Planning:

in silico digestion

Data Processing:

demultiplex ddRAD

demultiplex 2bRAD

mapping ddRAD reads

denovo locus generation 2bRAD

genotyping ddRAD mpileup

Analysis:

vcftools

PCA

DAPC

Admixture

 

Key Links:

Full 2bRAD denovo pipeline

Full 2bRAD Reference Genome pipeline

 

 

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