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Code Block
titleBWA output
cds
cd my_rnaseq_course/day_1_partB
head bwa_exercise/bwa_mem_results_transcriptome/C1_R1.mem.sam 
#lot of these are header lines that start with @
grep -v '^@' bwa_exercise/bwa_mem_results_transcriptome/C1_R1.mem.sam|head

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