Assembly of RNA-seq short reads into a transcriptome. 12 hour minimum ($564 internal, $720 $876 internal, $1,116 external) per project.
1. Quality Assessment
...
- Deliverables
FASTA file of assembly from full data (if it finishes).
Otherwise, FASTA file of assembly with in silico normalization to 50x coverage (if it finishes).
If neither assembly run finishes, no charge.
- Tools Used
- Trinity (Grabherr, et al 2011) is the best-known and most-used transcriptome assembler available today.
...