Page History

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• Linux Fundamentals
  • Getting started
  • Editing files
  • Stampede profile
  • Piping and redirection
• Using TACC's Stampede cluster
  • Stampede file systems

Part 2: Sequencing formats

• Overview of NGS data analysisformats and analyses
• The FASTA sequencing data format
• The FASTQ sequencing data format, with Illumina/GSAF-specific details
• Compression, Linux manipulation of fastq files

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