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1. To split the XSQ files into multiple XSQ files, by barcode:
convertFromXSQ.sh -s xsqfile -o outputpath
2. To convert each of the resulting XSQ files into csfasta and QV files:
convertFromXSQ.sh -c xsqfile
The converted files are created in the following directory: ./Libraries/<LibraryName>/<TagName>/reads
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