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titleExample alignment summary
11607353 reads; of these:

  11607353 (100.00%) were paired; of these:
	21592 (0.19%) aligned concordantly 0 times
    11417720 (98.37%) aligned concordantly exactly 1 time
    168041 (1.45%) aligned concordantly >1 times
    ----
    21592 pairs aligned concordantly 0 times; of these:
      82 (0.38%) aligned discordantly 1 time
    ----
    21510 pairs aligned 0 times concordantly or discordantly; of these:
      43020 mates make up the pairs; of these:
   	    25009 (58.13%) aligned 0 times
        9694 (22.53%) aligned exactly 1 time
        8317 (19.33%) aligned >1 times
99.89% overall alignment rate

 

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