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- -a means "archive mode", which implies the following options (and a few others)
- -p – preserve file permissions
- -t – preserve file times
- -l – copy symbolic links as links
- -r – recursively copy sub-directories
- -v means verbose
- -W means transfer Whole file only
- Normally the rsync algorithm compares the contents of files that need to be copied and only transfers the different parts.
- For large files and binary files, figuring out what has changed (diff-ing) can take more time than just copying the whole file.
- The -W option disables file content comparisons (skips diff-ing).
Since these are all single-character options, they can be combined after one option prefix dash ( - ). You could also use options -ptlrvW, separately, instead of using -a for "archive mode".
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The trailing slash ( / ) on the source and destination directories are very important for rsync (and for other Linux copy commands also)! rsync will create the last directory level for you, but earlier levels must already exist. | ||
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important for rsync (and for other Linux copy commands also)! rsync will create the last directory level for you, but earlier levels must already exist.Another useful option is -W (copy Whole files only). In its normal mode, rsync will copy only changed parts of newer files. For large files, figuring out what has changed (diff-ing) can take more time than just copying the whole file. The rsync -W option says to skip diff-ing. |
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mkdir -p $SCRATCH/data cds rsync -avPavWP $CORENGS/custom_tracks/ data/custom_tracks/ |
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rsync -avPavWP /work/projects/BioITeam/projects/courses/Core_NGS_Tools/custom_tracks/ data/custom_tracks/ |
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