To figure out whether a FASTQ file is in Sanger, Solexa or Illumina format, run
Code Block |
---|
get_fastq_format.pl <input_file> |
which will output "sanger", "solexa", or "illumina", depending on the ASCII characters in the quality string.
To figure out whether a FASTQ file is in Sanger, Solexa or Illumina format, run
Code Block |
---|
get_fastq_format.pl <input_file> |
which will output "sanger", "solexa", or "illumina", depending on the ASCII characters in the quality string.