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| Expand |
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| Remind me how to submit jobs to the lonestar queue |
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| Remind me how to submit jobs to the lonestar queue |
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qsub tc_launcher.sge
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| title | Use *qstat* to find the jobId for this job |
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qstat
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Step 7. Create a file called cuffmerge.commands to run cuffmerge on results from step 6.
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Step 8. Use launcher_creator to create a launcher for this cuffmerge job and submit it to the queue such that it runs after the previous job completes.
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launcher_creator.py -n cuffmerge -q normal -t 6:00:00 -j cuffmerge.commands -l cuffmerge_launcher.sge
qstat
qsub -hold_jid <jobid> cuffmerge_launcher.sge
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