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Part 1: Linux/TACC Introduction
- Overview of NGS data analysis
- Linux Fundamentals
- Overview of the TACC Stampede cluster
- Transferring files to/from TACC
Part 2: Sequencing formats
- Overview of NGS data analysis
- The FASTA sequencing data format
- The FASTQ sequencing data format, with Illumina/GSAF-specific details
- Compression, Linux manipulation of fastq files
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