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  • GS Amplicon variant analyzer
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Current Version 2.5.3. Full documentation from Roche.

Input options

  • Reference sequences
  • Amplicon information
  • Samples
  • Read data

Associations need to be made between all the input information.

Output options

  • Sample/variant information, including frequencies.
  • Ace files
  • Flowgrams - on GUI only
  • Histograms indicating variant positions.

Running GS Amplicon variant analyzer

GUI tool:

  • Can be accessed by typing gsAmplicon

Commandline tool:

  • doAmplicon <files>
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