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GENERAL PROTEOMICS

Ion source

Many links for basic mass spectrometry education, as well as applications like proteomics

http://ionsource.com/

Proteome Software (Scaffold) Resource Library

Introductory proteomics and presentations explaining database searching with Scaffold focus

http://proteome-software.wikispaces.com/Resource+Library

Matrix Science informational page 

Introductory proteomics and presentations explaining database searching with MASCOT focus

http://www.matrixscience.com/help_index.html

Thermo Fisher Piercenet Protein Methods

Protein Mass Spectrometry Analysis webpages on MS and quantitation in library of protein methods

https://www.thermofisher.com/us/en/home/life-science/protein-biology/protein-biology-learning-center/protein-biology-resource-library/pierce-protein-methods.html

Spring 2020 Proteomics research presentations/journal club

4/9/20 Daniel Howsmon "Informing signal transduction models with DIA proteomics"

4/2/20 Erin Seeley “Mass Spectrometry Imaging for Molecular Histology and Clinical Biomarker Discovery”

5/21/20 Seung Woo Ryu  "Proteome-wide identification of HSP70/HSC70 Chaperone Clients in Human Cells"

Proteomics lectures

Maria Person's CCBB short course Introduction to Proteomics lecture from Spring 2020

Person_CCBBshortcourse_2020.pdf

Maria Person's CCBB short course Protein ID/Scaffold tutorial from Spring 2020

Maria Person's CCBB short course from Spring 2018

Introduction to Proteomics

Person_Apr2018_CCBB.pdf

Maria Person's short course from Spring 2017

Introduction to Proteomics-Mass Spectrometry with Scaffold

Person_CCBB_Proteomics.pdf

National Cancer Institute c. 2011

Graphical, introductory video on protoemics and clinical applications

http://proteomics.cancer.gov/whatisproteomics/videotutorial

University of Colorado Systems Biology Core Facility

Karen Jonscher has three lectures on MS theory and biomedical applications

http://www.ucdenver.edu/academics/colleges/medicalschool/programs/bioanalytics/education/Pages/Lectures.aspx


Proteomics courses

BroadE Workshop Proteomics Dec 2013

Half day lecture course in proteomics with pdfs available online

https://drive.google.com/folderview?id=0B2dK2q40HDWeQ1VrY2lMLWk0dGs&usp=sharing


BroadE Proteomics Dec. 2012

2 day lecture course in proteomics from the Broad Institute with videos and pdfs available online

https://www.broadinstitute.org/partnerships/education/broade/proteomics-everything-you-always-wanted-know-were-afraid-ask

Day 1: Technology, samples and experiments

Day 2: From Lists to biological knowledge








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