...
| Software | Description | Path |
|---|---|---|
| express | Expression quantification | /usr/bin/express |
| featurecounts | Counting | /usr/bin/featureCounts |
| htseq | Counting | (perl 2.7) |
| kallisto | Expression quantification | /usr/bin/kallisto |
| STAR | Alignment | /usr/bin/STAR /usr/bin/STARlong |
| MultiQC | Report Generation | /usr/local/bin/multiqc |
Variant Analysis Tools
...