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- Introduction
- Overview NGS data processing, part 1 (NGSintro.pdf)
- Getting started at TACC
- Overview NGS data processing, part 2 (NGSintro.pdf)
- more Getting started at TACC
Day 2: NGS workflow overview and raw sequence pre-processing
- Overview NGS data processing, part 3 (NGSintro.pdf)
- Running batch jobs at TACC
- Pre-processing raw sequences
Day 3: Alignment and BAM file manipulation
- Overview NGS data processing, part 2 4 (NGSintro.pdf)
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Day 4: Post-Alignment Analysis
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