Title: Analysis using BEDTools  
Author: Daechan Park May 13, 2014
Last Changed by: Anna M Battenhouse Jun 09, 2023
Tiny Link: (useful for email) https://wikis.utexas.edu/x/8Lz5Aw
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Core NGS Tools (3)
    Home page: Core NGS Tools Home
    Page: Core NGS Resources
    Page: Day 5: Post-Alignment Analysis
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    Page: Day 5: Post-Alignment Analysis
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Jun 09, 2023 16:32 Anna M Battenhouse View Changes
Jun 08, 2023 23:10 Anna M Battenhouse View Changes
Jun 08, 2023 21:44 Anna M Battenhouse View Changes
Jun 08, 2023 08:51 Anna M Battenhouse View Changes
Jun 08, 2023 00:00 Anna M Battenhouse  
Outgoing Links
External Links (22)
    https://useast.ensembl.org/info/website/upload/gff3.html
    bedtools.readthedocs.io/en/latest/content/tools/getfasta.ht…
    bedtools.readthedocs.io/en/latest/content/tools/bamtofastq.…
    bedtools.readthedocs.io/en/latest/content/tools/merge.html
    https://software.broadinstitute.org/software/igv/download
    genome.ucsc.edu/FAQ/FAQformat.html
    bedtools.readthedocs.io/en/latest/content/tools/multicov.ht…
    bedtools.readthedocs.io/en/latest/content/tools/bamtobed.ht…
    https://genome.ucsc.edu/FAQ/FAQformat.html#format6.1
    bedtools.readthedocs.io/en/latest/content/bedtools-suite.ht…
    https://genome.ucsc.edu/goldenpath/help/bigWig.html
    bedtools.readthedocs.io/en/latest/content/tools/subtract.ht…
    https://genome.ucsc.edu/FAQ/FAQformat.html#format4
    https://genome.ucsc.edu/
    https://genome.ucsc.edu/FAQ/FAQformat.html#format1
    https://bedtools.readthedocs.io/en/latest/content/tools/gen…
    bedtools.readthedocs.io/en/latest/content/tools/coverage.ht…
    https://genome.ucsc.edu/goldenpath/help/bedgraph.html
    https://www.gencodegenes.org/
    https://bedtools.readthedocs.io/en/latest/content/tools/cov…
    bedtools.readthedocs.io/en/latest/content/tools/intersect.h…
    bedtools.readthedocs.io/en/stable/content/tools/closest.htm…
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