Title: Genome Variant Analysis Course 2019  
Author: Daniel Edward Deatherage May 19, 2019
Last Changed by: Daniel Edward Deatherage May 31, 2019
Tiny Link: (useful for email) https://wikis.utexas.edu/x/aZJXDQ
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Incoming Links
Bioinformatics Team (BioITeam) at the University of Texas (19)
    Page: Evaluating and processing raw sequencing data GVA2019
    Page: Bedtools tutorial -- GVA2019
    Page: Advanced breseq GVA2019
    Page: Molecular Index Error correction GVA2019
    Page: Structural Variant (SV) calling with SVdetect 2019
    Page: Bedtools tutorial -- GVA2020
    Page: MultiQC - fastQC summary tool -- GVA2019
    Page: Annovar Annotations -- GVA2019
    Page: Genome Analysis Toolkit (GATK) . -- GVA2019
    Page: Using TACC's Job Submission System (and 2019 end of class review)
    Page: Single Nucleotide Variant (SNV) calling Tutorial GVA2019
    Page: Genome Assembly (SPAdes) -- GVA2019
    Page: SSCS vs Trimmed Read Variant calls GVA2019
    Page: IGV Tutorial -- GVA2019
    Page: Exome Capture Metrics GVA2019
    Page: Read Mapping with bowtie2 Tutorial GVA2019
    Page: Lonestar5 Breseq Tutorial GVA2019
    Page: Human Trios -- GVA2019
    Page: Linux and Lonestar 5 Setup -- GVA2019
Hierarchy
Parent Page
    Page: Bioinformatics Courses and Content
Children (19)
    Page: Advanced breseq GVA2019
    Page: Annovar Annotations -- GVA2019
    Page: Bedtools tutorial -- GVA2019
    Page: Evaluating and processing raw sequencing data GVA2019
    Page: Exome Capture Metrics GVA2019
    Page: Genome Analysis Toolkit (GATK) . -- GVA2019
    Page: Genome Assembly (SPAdes) -- GVA2019
    Page: Human Trios -- GVA2019
    Page: IGV Tutorial -- GVA2019
    Page: Linux and Lonestar 5 Setup -- GVA2019
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Recent Changes
Time Editor  
May 31, 2019 05:04 Daniel Edward Deatherage View Changes
May 31, 2019 04:10 Daniel Edward Deatherage View Changes
May 31, 2019 03:16 Daniel Edward Deatherage View Changes
May 30, 2019 22:04 Daniel Edward Deatherage View Changes
May 30, 2019 21:10 Daniel Edward Deatherage  
Outgoing Links
External Links (4)
    https://utdirect.utexas.edu/apps/campus/buildings/nlogon/fa…
    barricklab.org/
    https://wikis.utexas.edu/display/GSAF/About+Us#Scott
    https://www.tacc.utexas.edu/
Bioinformatics Team (BioITeam) at the University of Texas (19)     Page: Evaluating and processing raw sequencing data GVA2019
    Page: Exome Capture Metrics GVA2019
    Page: Genome Assembly (SPAdes) -- GVA2019
    Page: Single Nucleotide Variant (SNV) calling Tutorial GVA2019
    Page: Bedtools tutorial -- GVA2019
    Page: Lonestar5 Breseq Tutorial GVA2019
    Page: IGV Tutorial -- GVA2019
    Page: Human Trios -- GVA2019
    Page: Annovar Annotations -- GVA2019
    Page: Genome Variant Analysis Course 2019
    Page: Genome Analysis Toolkit (GATK) . -- GVA2019
    Page: SSCS vs Trimmed Read Variant calls GVA2019
    Page: Linux and Lonestar 5 Setup -- GVA2019
    Page: Structural Variant (SV) calling with SVdetect 2019
    Page: Read Mapping with bowtie2 Tutorial GVA2019
    Page: Using TACC's Job Submission System (and 2019 end of class review)
    Page: MultiQC - fastQC summary tool -- GVA2019
    Page: Advanced breseq GVA2019
    Page: Molecular Index Error correction GVA2019