Title: TACC - High Performance Computing for NextGen Sequence Analysis  
Author: Matthew W Vaughn Oct 02, 2012
Last Changed by: John M Fonner Oct 07, 2012
Tiny Link: (useful for email) https://wikis.utexas.edu/x/eYtIAg
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Hierarchy
Parent Page
    Page: TACC stuff
Children (15)
    Page: How to edit files
    Page: Linux basics with Lonestar
    Page: Linux PATHs
    Page: Lonestar Essentials
    Page: Lonestar login nodes
    Page: Pre-flight instructions for Interactive Computing session
    Page: Read mapping with BWA and BOWTIE
    Page: Running a job on Lonestar
    Page: The modules system
    Page: The sftp and scp commands
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Recent Changes
Time Editor  
Oct 07, 2012 22:45 John M Fonner View Changes
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Oct 07, 2012 22:45 John M Fonner View Changes
Migrated to Confluence 4.0
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Oct 07, 2012 22:40 John M Fonner View Changes
Oct 07, 2012 22:38 John M Fonner  
Outgoing Links
External Links (4)
    cyberduck.ch/windows/Cyberduck-Installer-4.2.1.exe
    notepad-plus-plus.org/
    www.barebones.com/products/textwrangler/
    cyberduck.ch/Cyberduck-4.2.1.zip
Bioinformatics Team (BioITeam) at the University of Texas (19)     Page: Running a job on Lonestar
    Page: Pre-flight instructions for Interactive Computing session
    Page: Diagram of Lonestar's directories
    Page: Using the TACC Parametric Launcher to speed up mapping
    Page: Linux basics with Lonestar
    Page: Using nano on the command line
    Page: Using SFTP for file browsing on Linux.
    Page: Lonestar Essentials
    Page: Lonestar login nodes
    Page: Using threads to speed up mapping on a single compute node
    Page: TACC Genomics Modules Available
    Page: Using the Launcher to automate Rscript analyses
    Page: Variant calling using SAMtools
    Home page: Bioinformatics Team Home
    Page: Read mapping with BWA and BOWTIE
    Page: Installing Linux tools
    Page: Linux PATHs
    Page: The sftp and scp commands
    Page: The modules system