Title: Genome Variant Analysis Course 2017  
Author: Daniel Edward Deatherage Apr 13, 2017
Last Changed by: Daniel Edward Deatherage May 25, 2017
Tiny Link: (useful for email) https://wikis.utexas.edu/x/J7JyCQ
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Incoming Links
Bioinformatics Team (BioITeam) at the University of Texas (17)
    Page: Human Trios -- GVA2017
    Page: Advanced breseq GVA2017
    Page: Genome Assembly (velvet) -- GVA2017
    Page: Molecular Index Error correction GVA2017
    Page: Read Mapping with bowtie2 Tutorial 2017
    Page: Linux and Lonestar 5 Setup
    Page: Annovar Annotations -- GVA2017
    Page: Bedtools tutorial -- GVA2017
    Page: Exome Capture Metrics GVA2017
    Page: Structural Variant (SV) calling with SVdetect 2017
    Page: Using TACC's Job Submission System (and 2017 end of class review)
    Page: Lonestar5 Breseq Tutorial 2017
    Page: Single Nucleotide Variant (SNV) calling Tutorial GVA2017
    Page: Evaluating and processing raw sequencing data GVA2017
    Page: IGV Tutorial -- GVA2017
    Page: Genome Analysis Toolkit (GATK) 2017
    Page: SSCS vs Trimmed Read Variant calls GVA2017
Core NGS Tools (4)
    Page: 2022 Core NGS Resources
    Page: Core NGS Resources
    Page: 2021 Core NGS Resources
    Page: 2020 Core NGS Resources
Hierarchy
Parent Page
    Page: Bioinformatics Courses and Content
Children (17)
    Page: Advanced breseq GVA2017
    Page: Annovar Annotations -- GVA2017
    Page: Bedtools tutorial -- GVA2017
    Page: Evaluating and processing raw sequencing data GVA2017
    Page: Exome Capture Metrics GVA2017
    Page: Genome Analysis Toolkit (GATK) 2017
    Page: Genome Assembly (velvet) -- GVA2017
    Page: Human Trios -- GVA2017
    Page: IGV Tutorial -- GVA2017
    Page: Linux and Lonestar 5 Setup
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Recent Changes
Time Editor  
May 25, 2017 08:20 Daniel Edward Deatherage View Changes
May 25, 2017 07:03 Daniel Edward Deatherage View Changes
May 25, 2017 06:06 Daniel Edward Deatherage View Changes
May 24, 2017 07:52 Daniel Edward Deatherage View Changes
May 24, 2017 07:33 Daniel Edward Deatherage  
Outgoing Links
External Links (4)
    https://www.tacc.utexas.edu/
    https://wikis.utexas.edu/display/GSAF/About+Us#Scott
    barricklab.org/
    www.utexas.edu/maps/main/buildings/mez.html
Bioinformatics Team (BioITeam) at the University of Texas (18)     Page: IGV Tutorial -- GVA2017
    Page: Molecular Index Error correction GVA2017
    Page: Human Trios -- GVA2017
    Page: Read Mapping with bowtie2 Tutorial 2017
    Page: Single Nucleotide Variant (SNV) calling Tutorial GVA2017
    Page: SSCS vs Trimmed Read Variant calls GVA2017
    Page: Annovar Annotations -- GVA2017
    Page: Advanced breseq GVA2017
    Page: Exome Capture Metrics GVA2017
    Page: Genome Assembly (velvet) -- GVA2017
    Page: Genome Analysis Toolkit (GATK) 2017
    Page: Using TACC's Job Submission System (and 2017 end of class review)
    Page: Linux and Lonestar 5 Setup
    Page: Structural Variant (SV) calling with SVdetect 2017
    Page: Evaluating and processing raw sequencing data GVA2017
    Page: Genome Variant Analysis Course 2017
    Page: Lonestar5 Breseq Tutorial 2017
    Page: Bedtools tutorial -- GVA2017